Publications

(2019). Alternative cleavage and polyadenylation in health and disease. Nat Rev Genet..

(2018). Terminal exon characterization with TECtool reveals an abundance of cell-specific isoforms. Nat Methods.

(2018). Single-cell mRNA profiling reveals the hierarchical response of miRNA targets to miRNA induction. Mol Syst Biol.

(2018). Discovery of physiological and cancer-related regulators of 3' UTR processing with KAPAC. Genome Biol..

(2017). TFAP2A is a component of the ZEB1/2 network that regulates TGFB1-induced epithelial to mesenchymal transition. Biol Direct.

(2016). Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells. Sci Rep.

(2016). A comprehensive analysis of 3′ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogenous ribonucleoprotein C on cleavage and polyadenylation. Genome Res..

(2014). Global 3' UTR shortening has a limited effect on protein abundance in proliferating T cells. Nat Commun.

(2014). Embryonic stem cell-specific microRNAs contribute to pluripotency by inhibiting regulators of multiple differentiation pathways. Nucleic Acids Res.

(2014). ISMARA: automated modeling of genomic signals as a democracy of regulatory motifs. Genome Res.

(2014). Pegylated ifn-alpha regulates hepatic gene expression through transient Jak/STAT activation. J Clin Invest.

(2013). Modulation of epigenetic regulators and cell fate decisions by miRNAs. Epigenomics.